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0.7.0

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@sgsutcliffe sgsutcliffe released this 31 Jul 15:34
· 112 commits to main since this release
0.7.0
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Learn about vigilant mode.

0.7.0 - 2025/07/31

Added

  • Added a PREPROCESS_PROFILES process that adds a @ prefix to the --db_profiles sample_id to force unique identifiers for samples (required for profile_dists). If reference/background profiles are already unique process can be overriden with --skip_prefix_background_profiles true. PR #72
  • Made to new profile_dists parameters available to nextflow pipeline --pd_max_cpus and --pd_max_batch_size. PR #73

Modified

  • APPEND_PROFILES no longer renames sample_id with duplicate to prevent conflicts for profile_dists, user should keep the default --skip_prefix_background_profiles unless they know that there is no duplicates. PR #72
  • Moved the setting of non-filepath parameters for PROFILE_DISTS to the config/modules.config. PR #73
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