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v1.12 : Improved accuracy and phyml 3.3.20190909 support

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@blinard-BIOINFO blinard-BIOINFO released this 19 Sep 09:10
· 40 commits to master since this release
v1.12
42fb8cb 
* bugfix in phylo-kmer generation: DB build is slower but placement is now more accurate !
* default omega set to 1.5, for improved speed/accuracy balance.
* compatibility with phyml v3.3.20190909, it is highly recommended to update as it corrects a critical bug in ancestal reconstruction.
* minor changes related to verbosity
+ add stub.sh to rapidly build a standalone binary (no call to "java -jar"), instructions in README
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