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CRISPRme v2.3.1

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@lucapinello lucapinello released this 18 Aug 15:45
· 5 commits to main since this release

Fixed

  • Dict-less download --what index is now self-sufficient. A standalone
    download --what index for a merged variant index (e.g.
    NRG_3_hg38-dictless+hg38_1000G_HGDP) now fetches the per-dataset samplesID
    lists it needs before synthesizing the combined <vcf>.samplesID.txt, so it no
    longer requires a prior download --what all/--what samples. No-op when those
    files are already present (the --what all--what index path is unchanged).
  • Restored the unit-tests CI gate. A colon in a workflow step name
    ((#172: fakechrom match)) made GitHub Actions reject unit-tests.yml at startup
    (a 0 s "workflow file issue"), so the unit-tests job had silently not run since the
    v2.3.0 merge (the tests themselves pass locally). Quoting the name fixes the parse;
    the full 22-step unit suite runs in CI again.