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v1.3.0
Notes:
- new varpipe docker to deal with CDC regions
- add lineage task
- add LIMS report
- replace variant_interpretation task with interpretation workflow
- interpretation workflow = variant_interpretation + lineage calling + LIMS report
- replace delly task with structural variant workflow
- structural variant workflow = task delly for large deletions + snpEff annotation of larget deletions
- add concatenation task = concatenate vcf from variant caller and vcf from delly
- use concatenated vcf for interpretation workflow
- add snpit as additional lineage caller