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85 changes: 25 additions & 60 deletions cscs-checks/apps/namd/namd_check.py
Original file line number Diff line number Diff line change
@@ -1,22 +1,22 @@
import os

import reframe as rfm
import reframe.utility.sanity as sn
from reframe.core.pipeline import RunOnlyRegressionTest


class NamdBaseCheck(RunOnlyRegressionTest):
def __init__(self, variant, **kwargs):
super().__init__('namd_%s_check' % variant,
os.path.dirname(__file__), **kwargs)
self.descr = 'NAMD 2.11 check (%s)' % variant
class NamdBaseCheck(rfm.RunOnlyRegressionTest):
def __init__(self, version, variant):
super().__init__()
self.name = 'namd_%s_%s_check' % (version, variant)
self.descr = 'NAMD check (%s, %s)' % (version, variant)

self.valid_prog_environs = ['PrgEnv-intel']

self.modules = ['NAMD']

# Reset sources dir relative to the SCS apps prefix
self.sourcesdir = os.path.join(self.current_system.resourcesdir,
'NAMD')
'NAMD', 'prod')
self.executable = 'namd2'

self.use_multithreading = True
Expand Down Expand Up @@ -57,81 +57,46 @@ def __init__(self, variant, **kwargs):
}


@rfm.parameterized_test(['maint'], ['prod'])
class NamdGPUCheck(NamdBaseCheck):
def __init__(self, version, **kwargs):
super().__init__('gpu_%s' % version, **kwargs)
def __init__(self, variant):
super().__init__('gpu', variant)
self.valid_systems = ['daint:gpu', 'dom:gpu']
self.executable_opts = '+idlepoll +ppn 23 stmv.namd'.split()
self.num_cpus_per_task = 24
self.num_gpus_per_node = 1
if variant == 'prod':
self.tags |= {'production'}
else:
self.tags |= {'maintenance'}


class NamdGPUProdCheck(NamdGPUCheck):
def __init__(self, **kwargs):
super().__init__('prod', **kwargs)
self.tags |= {'production'}
self.reference = {
'dom:gpu': {
'days_ns': (0.16, None, 0.05),
},
'daint:gpu': {
'days_ns': (0.07, None, 0.05),
},
}


class NamdGPUMaintCheck(NamdGPUCheck):
def __init__(self, **kwargs):
super().__init__('maint', **kwargs)
self.tags |= {'maintenance'}
self.reference = {
'dom:gpu': {
'days_ns': (0.16, None, 0.05),
'days_ns': (0.18, None, 0.05),
},
'daint:gpu': {
'days_ns': (0.07, None, 0.05),
'days_ns': (0.11, None, 0.05),
},
}


@rfm.parameterized_test(['maint'], ['prod'])
class NamdCPUCheck(NamdBaseCheck):
def __init__(self, version, **kwargs):
super().__init__('cpu_%s' % version, **kwargs)
def __init__(self, variant):
super().__init__('cpu', variant)
self.valid_systems = ['daint:mc', 'dom:mc']
self.executable_opts = '+idlepoll +ppn 71 stmv.namd'.split()
self.num_cpus_per_task = 72
if variant == 'prod':
self.tags |= {'production'}
else:
self.tags |= {'maintenance'}


class NamdCPUProdCheck(NamdCPUCheck):
def __init__(self, **kwargs):
super().__init__('prod', **kwargs)
self.tags |= {'production'}
self.reference = {
'dom:mc': {
'days_ns': (0.49, None, 0.05),
},
'daint:mc': {
'days_ns': (0.27, None, 0.05),
},
}


class NamdCPUMaintCheck(NamdCPUCheck):
def __init__(self, **kwargs):
super().__init__('maint', **kwargs)
self.tags |= {'maintenance'}
self.reference = {
'dom:mc': {
'days_ns': (0.49, None, 0.05),
'days_ns': (0.57, None, 0.05),
},
'daint:mc': {
'days_ns': (0.27, None, 0.05),
'days_ns': (0.38, None, 0.05),
},
}


def _get_checks(**kwargs):
return [NamdCPUProdCheck(**kwargs),
NamdCPUMaintCheck(**kwargs),
NamdGPUProdCheck(**kwargs),
NamdGPUMaintCheck(**kwargs)]