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v1.0.0

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@ronin-gw ronin-gw released this 15 Aug 15:40
· 16 commits to master since this release
v1.0.0
313d33f

Major modernization release focused on Python upgrades, dependency cleanup, and architectural refactoring to improve reliability, portability, and test coverage.

Highlights:

  • Python 3.8-3.13 support; refresh packaging with pyproject.toml and updated build tooling.
  • Replace bx-python with pyBigWig.
  • Unify results/statistics model and simplify handler/factory design.
  • Stabilize multiprocessing: use spawn start method.
  • Introduce tests.

Breaking changes:

  • Drop Python2 and <3.8 support.
  • Default multiprocessing start method set to spawn.

Architecture and refactoring:

  • Move to factory-centric design; remove redundant strategy layer and clarify service/handler responsibilities.
  • Migrate from os.path to pathlib; add comprehensive type hints and mypy checks.
  • Remove obsolete Python 2 compatibility.

CI/CD and distribution:

  • Adopt cibuildwheel and stabilize matrix builds; optimize resource usage.
  • Improve BitArray build/link flags for macOS/ARM64 and Linux.
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