Skip to content
View scientific-research-data-management's full-sized avatar

Block or report scientific-research-data-management

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse

Scientific Research Data Management & FAIR Compliance Automation

Scientific Research Data Management & FAIR Compliance Automation

Build scalable, audit-ready Python automation that makes research data
Findable, Accessible, Interoperable, and Reusable β€” from the instrument to the institutional repository.

🌐 Visit the site β†’ www.scientific-research-data-management.org


About

Scientific Research Data Management is a practical, engineering-first knowledge base for turning the FAIR Guiding Principles into working software. It is written for the people who actually operate research data infrastructure β€” research data managers, academic IT teams, Python automation engineers, and open-science advocates β€” and every guide pairs architectural reasoning with complete, runnable code.

Where most FAIR resources stop at policy and principle, this site treats compliance as something you engineer: a persistent identifier reserved before a payload is durable, a license resolved before a dataset is published, provenance written before an asset is citable. The result is a library of deterministic, reproducible workflows that hold up to institutional review β€” not manual curation that drifts out of date.

What you'll find

The site is organised into four in-depth sections, each branching into focused topic guides and hands-on walkthroughs:

  • Core Architecture & FAIR Mapping β€” layered pipeline topology, metadata schema mapping and crosswalks, resilient API routing with circuit breakers, and how each FAIR sub-principle becomes an enforceable checkpoint at write time.
  • Data Ingestion & Metadata Enrichment β€” parsing electronic lab notebook exports, pandas enrichment pipelines, Pydantic V2 schema validation, async batch processing, message-broker streaming, and pipeline orchestration.
  • Open Science Infrastructure Planning β€” data-governance frameworks, funder-mandate alignment (NIH DMS, Horizon Europe), institutional repository strategy, and open-license configuration.
  • Persistent Identifiers & Repository Integration β€” minting DOIs with DataCite, automating deposits to Zenodo, Figshare, and Dataverse, Crossref metadata deposit, DOI/ARK/Handle selection, and identifier reconciliation.

Why it's worth your time

  • Production Python, not pseudocode. Every implementation uses Python 3.10+ with full type hints and the Pydantic V2 API β€” idempotent consumers, dead-letter queues, exponential backoff, content-addressed deduplication, and two-phase identifier minting you can lift into a real pipeline.
  • Grounded in the real standards. Dublin Core, schema.org, the SPDX License List, ORCID, the DataCite Metadata Schema, Crossref, ARK, and the Handle System are cited by name and mapped field-by-field.
  • Diagrams that explain the hard parts. Every guide carries a hand-authored, theme-aware diagram of the pipeline, state machine, or decision it describes.
  • Structured and discoverable. Pages ship valid JSON-LD (TechArticle, BreadcrumbList, HowTo, FAQPage) so the guidance is machine-readable as well as human-readable.

How the site is built

This is a fully static site with no build-time external dependencies at runtime:

  • Eleventy (11ty) static site generator, with Markdown content and Nunjucks templates.
  • KaTeX for server-rendered math and Prism for syntax highlighting.
  • Self-hosted assets and a service worker for fast, offline-capable delivery.
  • Deployed on Cloudflare.

Run it locally

npm install
npm run serve      # local dev server with live reload
npm run build      # production build into _site/

Contributing & feedback

Issues and suggestions that improve the accuracy or clarity of the guides are welcome β€” open an issue with the page and the specific correction or gap.

License

Released under the MIT License.

Popular repositories Loading

  1. scientific-research-data-management scientific-research-data-management Public

    Production Python guides for automating FAIR compliance across research data pipelines β€” metadata enrichment, DOI minting, repository sync, and audit-ready workflows.

    CSS 1