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Expand anndata compatibility#115

Merged
BorisMuzellec merged 9 commits intoscverse:mainfrom
scottgigante-immunai:patch-1
Apr 26, 2023
Merged

Expand anndata compatibility#115
BorisMuzellec merged 9 commits intoscverse:mainfrom
scottgigante-immunai:patch-1

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@scottgigante-immunai
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Reference Issue or PRs

Fixes #114

What does your PR implement? Be specific.

Expands anndata compatibility

@BorisMuzellec
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Hi @scottgigante-immunai, thanks for opening this PR!

I agree that it would be best to use the latest version of anndata.

Unfortunately I probably won't have much time to work on this in the next few days/weeks, but if you feel like investigating why tests fail, I'd be happy to review this PR once it passes tests. In the meantime, I can also help to some extent.

dtype argument with be deprecated in anndata 0.10
@scottgigante-immunai
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Thanks @BorisMuzellec ! Looks like I need your approval to run the tests, but otherwise I'm happy to debug.

@scottgigante-immunai
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@BorisMuzellec this should be good to go :)

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LGTM! Thanks a lot @scottgigante-immunai for your help, it's always awesome to have new contributors!

@BorisMuzellec BorisMuzellec merged commit e1d1752 into scverse:main Apr 26, 2023
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Allow wider anndata version

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