Add GitHub Copilot instructions#1286
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Marius1311 merged 1 commit intomainfrom Feb 18, 2026
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High-level guide for AI coding agents covering: - Two-layer architecture (kernels + estimators) - Module guide with pointers to key files - pyGPCCA sibling repo interface - Testing setup and conventions - Optional dependency landscape - Related projects (moscot, scvelo, scanpy)
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Add
.github/copilot-instructions.md— a guide for GitHub Copilot (and other AI agents) working on the CellRank codebase.Covers:
write_to_adata,from_adata, shadow AnnData)This file is picked up automatically by GitHub Copilot when working in the repo.