Skip to content

harden cooc for atera#671

Merged
Intron7 merged 2 commits into
mainfrom
fix-overflow-errors-for-large-cooc
May 19, 2026
Merged

harden cooc for atera#671
Intron7 merged 2 commits into
mainfrom
fix-overflow-errors-for-large-cooc

Conversation

@Intron7
Copy link
Copy Markdown
Member

@Intron7 Intron7 commented May 19, 2026

co_occurrence can overflow for very large datasets like Atera.

@codecov-commenter
Copy link
Copy Markdown

codecov-commenter commented May 19, 2026

Codecov Report

❌ Patch coverage is 95.23810% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 88.65%. Comparing base (282e207) to head (9374bca).

Files with missing lines Patch % Lines
src/rapids_singlecell/squidpy_gpu/_co_oc.py 94.44% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #671      +/-   ##
==========================================
+ Coverage   88.63%   88.65%   +0.01%     
==========================================
  Files          98       98              
  Lines        7364     7375      +11     
==========================================
+ Hits         6527     6538      +11     
  Misses        837      837              
Files with missing lines Coverage Δ
src/rapids_singlecell/_utils/_multi_gpu.py 98.59% <100.00%> (+0.02%) ⬆️
src/rapids_singlecell/squidpy_gpu/_co_oc.py 92.59% <94.44%> (+0.59%) ⬆️

@Intron7 Intron7 merged commit 4d46e03 into main May 19, 2026
26 of 34 checks passed
@Intron7 Intron7 deleted the fix-overflow-errors-for-large-cooc branch May 19, 2026 15:38
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants