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v1.3.1

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@sebastian-gregoricchio sebastian-gregoricchio released this 03 Aug 17:29
· 12 commits to main since this release
1.3.1
f6fd6c2

v1.3.1 - August 3rd 2026

  • added import.external(): builds a DEprot object directly from DIA-NN, Spectronaut, FragPipe, MaxQuant and Proteome Discoverer reports, with the shortcuts read.diann(), read.diann.matrix(), read.spectronaut(), read.fragpipe() and read.maxquant()
  • added import.msstats() for the summarized objects of MSstats (label-free) and MSstatsTMT (isobaric); the metadata are reconstructed from the object annotation when not provided
  • iq (MaxLFQ summarization) and nanoparquet (DIA-NN .parquet reports) are optional dependencies: they are requested only when needed and never installed without confirmation
  • updated vignette and manual accordingly

Full Changelog: 1.3.0...1.3.1

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