writeAlizer 1.6.3

writeAlizer 1.6.3 (2025-09-17)

CRAN policy & documentation improvements

• DESCRIPTION: acronyms expanded (e.g., CBM), software/package names single-quoted, and method references added with CRAN auto-link format (DOIs).
• Documentation: @return added to import_coh(), import_rb(), import_gamet(), import_merge_gamet_rb().
• Examples: \\dontrun{} replaced with \\donttest{} where needed; fast examples unwrapped; predict_quality() uses a tiny offline 'example' model seeded in tempdir() with cleanup.
• File I/O: no writes to home by default; examples/tests use tempdir(); caching standardized via tools::R_user_dir("writeAlizer","cache").
• New helpers: wa_cache_dir() and wa_cache_clear(ask=) for cache discovery/cleanup.
• Optional deps: new model_deps() reports (does not install) optional packages and prints an install hint; install_model_deps() deprecated.
• Tests: self-cleaning with withr fixtures; no temp detritus; removed deprecated global teardown.

Bug fixes & maintenance

• Stabilized example/test behavior when offline by mocking artifacts via writeAlizer.mock_dir.
• Suppressed noisy pre-processing variance warnings in integration tests.