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Version 1.0.3

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@sid-krish sid-krish released this 30 Mar 06:54
· 44 commits to main since this release
v1.0.3
d128849
  • Added align_reads.nf. This pipeline can be used to align reads to references.
  • Added combined_align_est.nf. This pipeline can be used to align reads and run theta_est.nf and rho_est.nf on them in one go. It can process multiple fastqs and fa simultaneously and process them in parallel.
  • Added combined_est.nf. Similar to above pipeline but it instead uses bams and fa as input. It can process multiple bas and fa simultaneously and process them in parallel.
  • Added collect_results.py. Used to collect and tabulate results generated by combined_align_est.nf pipeline.
  • Various other minor improvements to pipelines and scripts.
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