v0.0.2

Added

• npm distribution — install with npm install -g @skillicinski/bo. No Rust toolchain needed. Pre-built binaries for macOS (Intel + Apple Silicon) and Linux x86_64.
• DeepSeek provider support (deepseek-v4-flash, deepseek-v4-pro). Select with bo config --provider deepseek.
• bo status command — shows tree health and compile readiness.
• bo compile --all flag — recompile the full corpus and allow complete branch graph rewrite.
• bo collect accepts multiple URLs in one invocation and .txt files containing one URL per line.
• compile_model config key — pin a heavier model just for bo compile. Set with bo config --compile-model <id>.
• Compile validation gate — bo compile rejects responses that would result in no file changes and surfaces an actionable error.
• Interactive confirmation gate on bo raze — operators must type yes to proceed. No --force / --yes override (by design, so agents cannot bypass it).
• manifest.json is now the canonical record of tree topology and metadata. Lives at {tree}/.bo/manifest.json. Written atomically (tmp + rename) on every mutation.

Changed

• bo compile is incremental by default — only processes leaves collected since the last compile. Use --all for full recompile.
• bo config is now flag-driven: bo config --provider <name> --model <id> --compile-model <id>. Replaces the previous bo config auth / bo config get / bo config set subcommands.
• Default model changed from gpt-4o to gpt-4.1-mini.
• bo show now defaults to a frontmatter card view; use --full for the complete body.
• bo list reworked into a branch-centric tree view by default. New flags: --branch <name>, --recent, --limit <n>.
• All read commands (bo status, bo list, bo show, bo query, plus bo collect duplicate detection) consult the manifest. They no longer read index.jsonl, state.json, or scan the branches/ directory for metadata.
• bo collect and bo compile write the manifest as the primary commit, then mirror to index.jsonl / state.json / branch frontmatter as a transient safety net (removed in v0.0.2 stage 3b).
• Branch .md frontmatter renamed compiled_at → created_at for clarity. updated_at unchanged. The manifest's BranchRecord mirrors these names.
• bo raze now preserves stored provider credentials by default; use --include-auth for a full credential wipe.
• bo status no longer counts leaves with unparseable frontmatter as "uncompiled". Such leaves were always also flagged as skipped by health output; the duplicate signal is gone, the explicit skipped signal stays.
• Compile context-overflow and validation errors now reference the new flag-based config (bo config --compile-model <id> / bo config --model <id>).

Removed

• bo search command. Use bo list --terms <terms> for title/slug filtering.
• bo config auth subcommand. Save API keys via the OPENAI_API_KEY / DEEPSEEK_API_KEY env vars or by hand-editing ~/.bo/auth.json with flat keys (openai_api_key, deepseek_api_key).
• bo config get and bo config set subcommands. Replaced by the flag-driven bo config.

Recovery

• If manifest.json is missing on read, bo reconstructs it from the secondary store (index.jsonl + branch frontmatter) on the fly, persists the result, and prints manifest missing; reconstructed from secondary store to stderr. This affordance is removed in v0.0.2 stage 3b along with the secondary store itself.