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Minor bug fixes
Binarization was previously forcing the thresholds used for hydroxymethylation (regardless of methylation type)
Correctly uses gzip to compress files instead of gunzip (which does the opposite, whoops)
Features
Added a 'debug mode' option to the config file. If set to true, intermediate files for binarization steps are kept (previous behaviour). Otherwise these files are deleted (new default behaviour).
Added setup script to ease usage of scripts outside of specific UoE HPC system