aedseo 1.0.0

Deprecations

Features

• Added new arguments incidence and incidence_denominator to to_time_series() that allows the user to get output as incidence (#84).

• Added new argument population to to_time_series() and fit_growth_rate() that allows the user to add the background population connected to each observation (#83).

• Added new argument use_offset to seasonal_onset() that allows the user to add the background population to adjust the growth rate estimations (#83).

• Added new feature to estimate multiple waves in combined_seasonal_output (#77).

• Added estimate_disease_threshold() for users to easier estimate the disease specific threshold (#85).

Improvements

• Observations are now divided into cases and incidence, which is implemented into all functions in the package. Cases are used as default, but if the user additionally inputs population the output will be incidence (#84).

Minor changes