CytokineLink: a map of cytokine communication for inflammatory and infectious diseases
This is the publication GitHub repository for the research article titled CytokineLink: a map of cytokine communication for inflammatory and infectious diseases.
Prospective users can find the generated networks in the database folder in .tsv format. Alternatively, users can navigate to the following NDEx pages to interrogate the data:
Cytokine to cytokine (simplified): http://www.ndexbio.org/#/network/b4cd9550-e321-11eb-b666-0ac135e8bacf
Cell to cell (simplified): http://www.ndexbio.org/#/network/2d8fec2e-e31f-11eb-b666-0ac135e8bacf
Cell to cell: http://www.ndexbio.org/#/network/f9b2145a-e323-11eb-b666-0ac135e8bacf
Cytokine to cytokine: http://www.ndexbio.org/#/network/85d4d317-e323-11eb-b666-0ac135e8bacf
The validation folder contains the scripts used to measure the significance of the cytokine - cytokine metainteractions using gene expression data from GEO.