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GECKO 2.0.2

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@BenjaSanchez BenjaSanchez released this 18 Feb 09:58
v2.0.2
4b04196
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Learn about vigilant mode.
  • Features:
    • FSEOF implementation for ecModels in /geckomat/utilities/ (PR #119).
    • Routines for quickly generating context-specific ecModels from a general ecModel, also in /geckomat/utilities/ (PR #120).
  • Fixes:
    • Closes #116: Migrated CI to Travis-CI.com (PR #118).
    • prot_abundance.txt can now be an empty file (for organisms not present in pax-db) without the pipeline erroring (PR #124).
    • Removes storage of metabolite notes in the ecModel, which were causing an error in COBRA (PR #125).
  • Documentation/Styling/Others:
    • Added contributing guidelines, code of conduct and PR/issue templates (PR #115).
    • Closes #123: Simplified GECKO pipeline log (PR #128).
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