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v1.1.6
This update features better compatibility with other apps for microbial analysis. Other improvements have been made to the database, predictive tools, and plots.
- Compatibility with other apps
- Output from other apps can be inputted for analysis
- Four apps supported in total
- IMG/M (newly supported)
- KEGG Automatic Annotation Server (KAAS) (better supported via error fixes)
- QIIME2 (previously supported)
- DADA2 (previously supported)
- Database
- Added information on fermentation for n = 1,343 organisms
- Data are from BacDive
- Added information on fermentation for n = 1,343 organisms
- Features for predictive tools
- Predict traits from taxonomy
- Now capable of predicting probability of a trait (not just presence/absence)
- Predict traits using machine learning
- Now comes with 21 pre-trained models for predicting traits
- Predict traits from taxonomy
- Plots
- Plots now expand to fit window
- Other improvements
- Improved file structure
- R scripts now in hierarchical folders
- Error fixes
- Fixed errors in selecting organisms and unbalanced intermediates in Predict traits from networks
- Improved file structure