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Revisions

  • - Adding how to simulate multi-gene alignment from multiple gene trees - Other minor updates

    @trongnhanuit trongnhanuit committed Oct 11, 2021
    57fcaf9

  • Update the default Indels-size distribution

    @trongnhanuit trongnhanuit committed Oct 7, 2021
    784d3d1

  • Add link to AliSim user manual into the sidebar

    @trongnhanuit trongnhanuit committed Oct 6, 2021
    6b889d8

  • Adding substitution-level mixture models

    @trongnhanuit trongnhanuit committed Oct 6, 2021
    01ebc51

  • Test committing on new mac

    @trongnhanuit trongnhanuit committed Oct 2, 2021
    0b16c1a

  • Adding option to disable outputting an additional file of sequences without gaps (when using Indels)

    @trongnhanuit trongnhanuit committed Sep 21, 2021
    9418a6f

  • Update Indel-size

    @trongnhanuit trongnhanuit committed Sep 18, 2021
    99a6acb

  • Adding simulating multi-genes alignment Fixing grammar mistakes

    @trongnhanuit trongnhanuit committed Sep 16, 2021
    f7346de

  • Adding FunDi model, moving Branch-specific-model from Complex Models to AliSim home page

    @trongnhanuit trongnhanuit committed Sep 16, 2021
    80431e7

  • Update AliSim homepage and minor changes in Substitution-Models

    @trongnhanuit trongnhanuit committed Sep 16, 2021
    e03aee5

  • change name

    @bqminh bqminh committed Sep 10, 2021
    0f83156

  • update alisim doc

    @bqminh bqminh committed Sep 10, 2021
    41f446b

  • Merge branch 'master' of https://github.com/iqtree/iqtree2.wiki

    @bqminh bqminh committed Sep 10, 2021
    a42a368

  • Update wrong urls

    @trongnhanuit trongnhanuit committed Sep 7, 2021
    c4db294

  • Minor updates

    @trongnhanuit trongnhanuit committed Sep 6, 2021
    f285d9f

  • Adding continuous Gamma model

    @trongnhanuit trongnhanuit committed Sep 3, 2021
    8ca9045

  • Flexibly support both separators (comma, forward slash) when specifying indel-size distributions

    @trongnhanuit trongnhanuit committed Aug 31, 2021
    604a242

  • Update Indels

    @trongnhanuit trongnhanuit committed Aug 23, 2021
    14a762b

  • Update option --indel-distribution

    @trongnhanuit trongnhanuit committed Aug 21, 2021
    b4b2016

  • Minor update: change to -nt intead of --nt

    @trongnhanuit trongnhanuit committed Aug 18, 2021
    53e9b0d

  • Adding -nt <NUM> to set the number of threads in command reference

    @trongnhanuit trongnhanuit committed Aug 18, 2021
    bca4517

  • Merge branch 'master' of https://github.com/iqtree/iqtree2.wiki

    @bqminh bqminh committed Aug 17, 2021
    2eed870

  • Adding AliSim Wiki, updating how to use AliSim with standard/complex models

    @trongnhanuit trongnhanuit committed Aug 13, 2021
    d76ba39

  • add FAQ about alignment sites and patterns

    @bqminh bqminh committed Jul 5, 2021
    546f160

  • add Seo paper citation

    @bqminh bqminh committed May 19, 2021
    e73a777

  • fix URL

    @bqminh bqminh committed May 18, 2021
    994f099

  • minor update Rootstrap

    @bqminh bqminh committed Apr 21, 2021
    a2a701e

  • add content for rootstrap

    @bqminh bqminh committed Apr 20, 2021
    90d3e54

  • fix typos

    @bqminh bqminh committed Apr 20, 2021
    ff9c659

  • add Rootstrap tutorial

    @bqminh bqminh committed Apr 20, 2021
    a3d9806