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Revisions

  • update partition with mixing different datatypes

    @trongnhanuit trongnhanuit committed Nov 25, 2021
    65de9aa

  • add download link for AliSim

    @bqminh bqminh committed Nov 23, 2021
    d628393

  • Update `--site-freq` and `--site-rate` options

    @trongnhanuit trongnhanuit committed Nov 16, 2021
    0b24b69

  • Add references

    @trongnhanuit trongnhanuit committed Nov 12, 2021
    2843335

  • Adding --site-freqs and --rate-heterogeneity

    @trongnhanuit trongnhanuit committed Nov 11, 2021
    a277ae3

  • Updated Estimating amino acid substitution models (markdown)

    @cuongbb cuongbb committed Nov 8, 2021
    0029e28

  • remove strange first code

    @bqminh bqminh committed Nov 2, 2021
    bbf61e6

  • add data/plant_10alignments.zip

    @cuongbb cuongbb committed Oct 30, 2021
    f2a4c57

  • correct the command line

    @cuongbb cuongbb committed Oct 30, 2021
    fb605f6

  • reconstruct layout, add rev models

    @cuongbb cuongbb committed Oct 29, 2021
    c28f8a9

  • modify _Sidebar.md

    @cuongbb cuongbb committed Oct 29, 2021
    23ee363

  • add sample training data file (10 genes of plant)

    @cuongbb cuongbb committed Oct 29, 2021
    b6250ee

  • rename back to AliSim

    @bqminh bqminh committed Oct 26, 2021
    328107d

  • change name

    @bqminh bqminh committed Oct 26, 2021
    8ec065c

  • update alisim

    @bqminh bqminh committed Oct 26, 2021
    bfd42a1

  • Merge branch 'alisim' of https://github.com/iqtree/iqtree2.wiki

    @trongnhanuit trongnhanuit committed Oct 25, 2021
    37738cd

  • Merge branch 'master' of https://github.com/iqtree/iqtree2.wiki into alisim

    @trongnhanuit trongnhanuit committed Oct 25, 2021
    4f5b0d9

  • Merge branch 'master' of https://github.com/iqtree/iqtree2.wiki

    @trongnhanuit trongnhanuit committed Oct 25, 2021
    fdbc42f

  • update output format

    @trongnhanuit trongnhanuit committed Oct 25, 2021
    cc2a542

  • Updated nQmaker (markdown)

    @cuongbb cuongbb committed Oct 25, 2021
    fe57c4d

  • towards modifying Qmaker tutorial

    @bqminh bqminh committed Oct 25, 2021
    253cab0

  • add QMaker tutorial

    @cuongbb cuongbb committed Oct 24, 2021
    455b5fd

  • Finalize AliSim user manual

    @trongnhanuit trongnhanuit committed Oct 21, 2021
    a3403a5

  • polish alisim doc

    @bqminh bqminh committed Oct 20, 2021
    4a49de3

  • Not require a super tree for topology-unlink partitions

    @trongnhanuit trongnhanuit committed Oct 16, 2021
    aed9a71

  • Revising AliSim user manual

    @trongnhanuit trongnhanuit committed Oct 16, 2021
    be6a781

  • Revise AliSim, still TODOs

    @bqminh bqminh committed Oct 15, 2021
    2f5973f

  • Revise AliSim, still TODOs

    @bqminh bqminh committed Oct 15, 2021
    6f3351c

  • - Move Simulations with complex models (partition, mixture, heterotachy models) to AliSim - Describe how to simulate alignments with DNA error model

    @trongnhanuit trongnhanuit committed Oct 13, 2021
    b1e3894

  • Merge branch 'alisim' of https://github.com/iqtree/iqtree2.wiki into alisim

    @trongnhanuit trongnhanuit committed Oct 11, 2021
    78738e9