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v1.1.2

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@TieuLongPhan TieuLongPhan released this 23 Mar 09:30
· 10 commits to main since this release
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SynKit v1.1.2 — Release Notes

We are pleased to announce SynKit v1.1.2, which introduces important bug fixes and new capabilities for reaction modeling and chemical reaction network analysis.


🐞 Bug Fixes

Rule application

  • Improved handling of implicit hydrogens during rule application.
  • This fix resolves cases where hydrogen accounting could lead to incorrect transformation behavior and improves the robustness of downstream reaction processing.

✨ New Features

CRN properties

SynKit now provides additional utilities for analyzing chemical reaction networks (CRNs), including:

  • Pathway realizability
    Assess whether a pathway can be consistently realized under the network constraints.

  • CRN reachability
    Evaluate whether specific species or states can be reached from a given initial condition within the reaction network.

Reaction rebalancing

  • Added support for partial rule application for rebalancing.
  • This enables more flexible correction and completion of reactions when full rule application is not possible or not required.

📌 Notes

These updates further strengthen SynKit’s support for rule-based reaction processing, reaction correction, and CRN-level analysis.

If you encounter any issues or have performance feedback, please report them through the issue tracker.