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2. PhenoDB overview

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Johan Källberg Zvrskovec edited this page Mar 13, 2023 · 17 revisions

#Schematic overview of entities (slightly simplified) Screenshot 2023-03-13 at 10 38 50

#Schema description

  • coh Cohort data schema. Holds individual level data.
  • sec Secure cohort data schema. Holds more sensitive individual level data that is always deemed to be hidden from a standard extraction. This can be individual identifiable identifiers such as study participant ID's, personal contact information etc.
  • sum Summary data schema. This schema holds non-individual level data and aggregated summary statistics such as phenotype population prevalences and genotype association dataset specific data.
  • met Metadata schema. Holds metadata of the individual level data in the coh and sec schemas, and of the summary level data in the sum schema.

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