Assembly and intrahost/low-frequency variant calling for viral samples
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Updated
Jul 3, 2024 - Nextflow
Assembly and intrahost/low-frequency variant calling for viral samples
Climate science at high latitudes: eScience for linking Arctic measurements and modeling
SARS-CoV-2 workflow for nanopore sequence data
Pipeline to generate consensus.fasta files and identify pangolin lineage and nextstrain clade of Sars-CoV-2 genomes from ONT sequencing
a set of tools for viral amplicon schemes
Nextflow pipeline to process SARS-CoV-2 genomes by Nanopore Sequencing using ARTIC (https://github.com/artic-network/fieldbioinformatics) tools
quick demo of the ARTIC pipeline
Article Search Web-App
CODEHOP-mediated genotyping of HIV-1
Preprocessing of raw reads obtained using ARTIC's protocol for sequencing SARS-CoV-2 genome.
SINTONIZAR PID CON ARDUINO – CONTROL DE POSICIÓN DE UNA PELOTA EN LEVITACIÓN
A toolkit for monitoring ONT MinION sequencing, followed by data analysis, for viral genomes amplified with tiled amplicon sequencing.
App that uses React and the Art Institute of Chicago's API to allow users to browse different art pieces.
My goal is to see how the choice of a reference genome affects the artic pipelines accuracy.
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