Differential expression analysis of CAMA-1 cells in the context of ribociclib resistance and facilitation.

Code for the article "Disruption of cancer cell functions by task-specific drug perturbations"

TNTurnerLab Code for Revio Neuro-2a paper

Unofficial API for the Cellosaurus

Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.

Cell Line Authentication from ChIP-seq data

COSMIC数据库全部细胞系内容

A clinical genomics-guided prioritizing strategy enables accurately selecting proper cancer cell lines for biomedical research

This repository contains code for MFmap (model fidelity map), a semi-supervised generative model integrating gene expression, copy number and mutation data, matching cell lines to cancer subtypes. MFmap compresses high dimensional omics data of cell lines and bulk tumours into subtype informative low dimensional latent representations and predic…

Pipeline for testing drug response prediction models in a statistically and biologically sound way.

Python implementation of TRANSACT, a tool to transfer non-linear predictors of drug response from model systems to tumors.

Sobolev alignment of deep probabilistic models for comparing single cell profiles

Multi-tasking (drug response, cell line classification, etc.) Uno Implemented in PyTorch.

Breast Cancer Single Cell Atlas

Communitiy-based Cell Line Ontology

Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.