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geneSpark is a bioinformatics software program written in Python and Apache Spark for big data epigenetic histone modification ChIP-seq analysis.
Updated
Apr 30, 2016
Python
Updated
May 27, 2016
Python
AQUAS TF ChIP-seq pipeline
Updated
Feb 21, 2017
Ruby
ChIP-seq pipeline (Nextflow)
NGSハンズオン講習会2016年 NGS解析基礎、RNA-seq、Reseq、ChIP-seq資料
Integrating motif information with chip-seq binding signal
Updated
Apr 28, 2017
Python
MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets
Updated
May 31, 2017
Python
Predicting Transcription Factor Binding Sites from ENCODE data using Machine Learning
Updated
Jul 7, 2017
Python
R package to provide gene transfer format files from commonly investigated model organisms in ChIP-seq studies
Demo dataset & usage for HiC-Bench ChIP-Seq pipeline
Updated
Jul 31, 2017
Shell
optimized protocol for processing 50-bp SE ChIP-seq
Updated
Sep 27, 2017
Shell
ChIPSeeker genomic region summary plotting and annotation script
ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps
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