A library and toolkit for common representation and analysis of gene expression profile data
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Updated
Mar 29, 2018 - C++
A library and toolkit for common representation and analysis of gene expression profile data
Mapping reads to a corresponding genome using a suffix tree (linear time construction) and Smith-Waterman local alignment algorithm
published by Secomb et. al
Demultiplex 454 Genome Sequencer reads from a SFF file
Team Pythagoras of the HackBio Virtual Internship, 2021
A visual simulation of the Hindmarsh-Rose neuron model.
Stochastic chemical kinetics using Gillespie algorithm and chemical master equation, application to enzyme kinetics
BALL project 1.1.1 bugs-free version computational chemistry
Simulation of space-embedded molecular aggregates using Potts model
Stochastic simulator of mitochondria represented as a dynamic spaceless graph
Artificial Biological Intelligence
SciCell++ is an object-oriented framework for the simulation of biological and physical phenomena modelled as continuous or discrete processes.
RPTRF: A Rapid Perfect Tandem Repeat Finder Tool for DNA Sequences
PRAWNS: A fast and scalable bioinformatics tool that generates an efficient pan-genome representation of closely related whole genomes to provide a concise list of genomic features
A gRNA database generation tool.
Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.
The Biochemical Algorithms Library
Chaste - Cancer Heart And Soft Tissue Environment - main public repository.
Python3 binding to mRMR Feature Selection algorithm (currently not maintained)
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