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A front-end GUI to map NGS DNA sequencing data using HISAT backend tool. This software offers robust seamless queueing of the mapping operations along with parameter memory for quick and easy customization.
Creates a construct developed by the Niles Lab at MIT, designed to deliver a 3' UTR post-transcriptional regulatory element payload to a specific given gene in Plasmodium falciparum.
A pipeline to map and visualize in vitro acquired CRIPSR spacers from Illumina sequence data. McKitterick, A. C.; LeGault, K. N.; Angermeyer, A.; Alam, M.; Seed, K. D. Competition between mobile genetic elements drives optimization of a phage-encoded CRISPR-Cas system: insights from a natural arms race. Phil. Trans. R. Soc. B 2019, 374, 20180089…
Analysis of Next-Generation Sequencing(NGS) data for Clustered Regularly Interspaced Short Palindromic Repeats(CRISPR) Homology Directed Repair(HDR) experiments