用于bioos的大规模数据分析

Automation tool for high-throughput sequencing DNA methylation data

Reconstructed archive of Gentoox-Loader (Cromwell fork)

An example implementation for the Cromwell workflow management system on PBS Pro

Determining reproducibility of Epigenomic signal for Answer ALS

Containerisation-agnostic LSF execution configuration for Cromwell

Bioinformatics workflows developed for and used on the St. Jude Cloud project.

utilities for cromwell hackathon

Cromwell+WDL Boilerplate

varscan repo contains code for Varscan workflow

BSF ATAC-seq pipeline

An integrated analysis platform for efficiently achieving computational reproducibility

A CGI for getting the status of a workflow execution in Cromwell

Focused on constructing a phylogenetic tree from Philippine strains of Candida albicans.

Web-based interface to the NMDC EDGE platform

Setting up Cromwell + AWS GWF (Genomics Workflows)

GATK and VARSCAN analysis pipeline

ACES is a workflow to query small sequences in a large set of genomes. It provides several outputs including BLAST results, a multiple sequence alignment file, a graphical fragment assembly file, and a phylogenetic tree file.