Automation tool for high-throughput sequencing DNA methylation data

Reconstructed archive of Gentoox-Loader (Cromwell fork)

An example implementation for the Cromwell workflow management system on PBS Pro

Cromwell Output Transfer

Bioinformatics workflows developed for and used on the St. Jude Cloud project.

Determining reproducibility of Epigenomic signal for Answer ALS

Cromwell+WDL Boilerplate

Cromwell pipelines for human genetic data

A CGI for getting the status of a workflow execution in Cromwell

Focused on constructing a phylogenetic tree from Philippine strains of Candida albicans.

Setting up Cromwell + AWS GWF (Genomics Workflows)

varscan repo contains code for Varscan workflow

Example Repository for setting up GitHub Actions for WDL and CWL workflows for CI/CD

Workflow pipelines for the Solita TRE

Automated and reproducible tool for identifying genomic variants at scale ☕️

An opinionated Cromwell orchestration manager.

用于bioos的大规模数据分析

Containerisation-agnostic LSF execution configuration for Cromwell