TAPAS - Translational Algorithms for Psychiatry-Advancing Science
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Updated
Feb 6, 2024 - MATLAB
TAPAS - Translational Algorithms for Psychiatry-Advancing Science
Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.
Automatic Analysis (aa)
Standalone MATLAB implementation of permutation TFCE correction
GNU Octave library for connectivity analysis in large fMRI datasets
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
SPM (Statistical Parametric Mapping) - Development Version
Utility MATLAB functions and wrappers for fMRI data analysis, mostly based in SPM12
Code supporting 'Geometric constraints on human brain function'
a set of function to make it easier to create behavioral, EEG, fMRI experiment with psychtoolbox
Machine Learning in NeuroImaging (MALINI) is a MATLAB-based toolbox used for feature extraction and disease classification using resting state functional magnetic resonance imaging (rs-fMRI) data. 18 different popular classifiers are presented. With slight modifications, it can also be used for any classification problem using any set of features.
Insight & Inference for DVARS: 3-part variance decomposition, gives units & p-values to DVARS measures as well as spatiotemporal rs-fMRI diagnostic.
Some tools for the extraction and plot of second-level ROI-to-ROI results from CONN Toolbox
Pattern classification with fMRI data. Reproduced from Poldrack's repository by Matlab.
A Matlab-based software package for preprocessing the resting-state fMRI data
Repository home of custom MATLAB scripts designed to perform mass univariate analyses using the Statistical Parametric Mapping (SPM) software package
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