Software platform for clinical neuroimaging studies

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis and ensure quality in stroke research using T1-weighted MRIs

Python Library to Read FreeSurfer's Cortical Parcellation Anatomical Statistics

A python module designed to reduce your brain load while accessing FreeSurfer brain surface and morphometry data files of single subjects and groups.

Python Library to Read and Write Surface Files in Freesurfer's TriangularSurface Format

SphericalLabeling: Cortical Surface Labeling using Spherical Data Augmentation and Context-aware Training

Pydra tasks for FreeSurfer designed for Clinica

Python script & library to read hippocampal volumes computed by Freesurfer & ASHS

A Pegasus workflow for running FreeSurfer on the Open Science Grid

Sphere2dice converts Cortical Brain Morphometry data from FreeSurfer or Gifty type into a stack of 2D images and saves is as numpy array. This stack of images is easier to use as input to conventional CNNs, while avoiding projection issues other methods suffer from.

Run FreeSurfer commands within 3D Slicer

age of brain measurement as use FREESURFER tool