MF1 Research and Innovation website
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Updated
Jun 10, 2024 - HTML
MF1 Research and Innovation website
Material used for a bioinformatics computer lab course, covering DNA/RNA sequence assembly and analysis, phylogenetic analysis, gene functional annotation, and metagenomic analysis
Various scripts I used during my tenure as a Postdoctoral Associate at Cornell University
Repository for reports and data of bioinformatics analyses from internship in Indonesia
antibiotic resistance profiling of nanopore reads
Extract raw data from krona.html files and count the reads at each taxonomy level
Analysis of drought metagenomic data using ENNB methods
Anchor is a 16S rRNA gene amplicon pipeline for microbial analysis of multiple environmental samples.
MetaFast is a novel metagenomic analysis tool employing efficient containment search techniques and heuristics for read mapping to achieve significant speedup while maintaining high accuracy. This positions MetaFast as an efficient solution, optimally balancing speed and precision in metagenomic analysis.
Personal Site for research pieces and other happenings in my life
MAEP(Metagenomics Assebly Evaluation Pipeline).This pipeline is a new version of LAEP.
The PanKEGG Flask application is a web-based tool for visualizing, comparing, and exporting metagenomic data related to taxonomy and pathways.
Website for Koslicki Lab.
A knowledge graph of the wastewater treatment microbiome and its biological context
The website showcases Arun Boddapati's professional portfolio, emphasizing his expertise as a bioinformatics scientist and machine learning expert.
Study of cyanobacterial harmful algal blooms in Lake Erie using autonomous sampling and DNA sequencing
TrIdent- Transduction Identification: Automatic detection, classification and characterization of active transduction events in microbiomes.
PuntSeq - Chasing the microbial diversity of Cambridge's freshwater
Microbiome Study of Lupus Patients
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