Repository with some of codes that helps me to work with DNA.

Measuring DNA concentration of a sample by comparing to a standard curve

⛓️ Automating construction of oligo library sequences for oligo array synthesis.

Software for preparing molecular structures, performing docking and analyzing molecular interactions

A collection of simple python tools for molecular biology and bioinformatics

A python tool to analyse genetic sequences

Here I will upload projects and/or homework corresponding to bioinformatics

Classification of Residue-Residue Interactions in Protein Structures using Deep Learning

🔴🟢🔵⚫️ Generating sets of random DNA sequences optimized for use in high-throughput sequencing.

🧬 Python utilities for working with nucleotide sequence strings.

⚡ A repository containing research outputs from my computational chemistry Honours project.

Code used to plot the figures in "Extensive folding variability between homologous chromosomes in mammalian cells"

Simple web app to find candidate PCR primers from exon sequences

Use the MMLigner structural alignment program from within Yasara!

Searching for the miRNA names in the databases, normalizing the targeting value if needed, and comparing and finding the intersection of scanned databases.

Basic script to identify PCR primer candidates from the gene sequence

A novel deep polygenic neural network for predicting and identifying yield-associated SNPs in Indonesian rice accessions.

Generate a package-manager-friendly archive of ABI gene expression maps registered in SAMRI standard space.

A Panel progressive web app for synonymous recoding of viral genomes with CpG dinucleotides

Creates a construct developed by the Niles Lab at MIT, designed to deliver a 3' UTR post-transcriptional regulatory element payload to a specific given gene in Plasmodium falciparum.