Annotation pipeline for HPDS
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Aug 22, 2024 - Python
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pysam
Here are 11 public repositories matching this topic...
ld-tools: toolkit for linkage disequilibrium calculation designed to work locally
python
bioinformatics
linkage-disequilibrium
sqlite
snp
ld
vigg
pysam
ldlink
ld-calculator
haploreg
ld-tools
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Feb 28, 2024 - Python
Small program to mask positions that are likely to result in PMD artifact from a BAM file using a predefined SNP catalog
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Updated
Oct 25, 2024 - Python
Progetto di Elementi di Bioinformatica, A.A. 2021/2022
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Updated
Mar 7, 2022 - Jupyter Notebook
Investigating unmapped reads within next generation sequencing data will provide additional information regarding the source of the trace microbial reads.
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Jul 28, 2022 - Jupyter Notebook
Pysam module (python2.7) singularity container
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Nov 21, 2018 - Shell
Bioinformatics CLI tool to generate WIG tracks from SAM/BAM files
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Feb 26, 2016 - Python
vue app with flask REST api to process genomic data
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Updated
Nov 17, 2023 - Jupyter Notebook
Per-position and summary statistics for BAM files
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Updated
Jan 10, 2023 - Python
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