Code for design of diagnostic PCR primers, and metabarcoding markers.
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Updated
Nov 7, 2023 - Python
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qpcr
Here are 6 public repositories matching this topic...
The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacterial species in complex ecosystems.
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Apr 24, 2024 - Python
Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.
primer
virus
container
sequencing
conda
python3
easy-to-use
amplicons
pcr
illumina
oxford-nanopore
qpcr
degenerate-primers
primer-design
sanger
pypi-package
primer-blast
consensus-sequences
ampliconseq
multiplex-pcr
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Updated
Sep 6, 2024 - Python
A python package to analyse qPCR data for single-use or high-throughput application
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Oct 31, 2023 - Python
Bioinformatics CNV Detection with Random Forest Model
python
machine-learning
bioinformatics
random-forest
david
bioinformatics-pipeline
pcr
cnv
qpcr
ddpcr
training-data
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Updated
Dec 29, 2019 - Python
Qupid (Quantitative PCR Interface to Delta-Delta-Ct) - a versatile web-application for swift Delta-Delta-Ct analysis of qPCR data
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Feb 13, 2023 - Python
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