Proof of concept of a RNA-Seq pipeline from reads to count matrix (including quality control) with Nextflow and additional example RNA-Seq analysis in R
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Updated
Jan 12, 2022 - HTML
Proof of concept of a RNA-Seq pipeline from reads to count matrix (including quality control) with Nextflow and additional example RNA-Seq analysis in R
Quality Control TV Digital (CusMeDroid)
A review of an R-Package for statistical QCC (Quality Control Charts).
An analysis that once lived in greenelab/sc-cancer-hgsc/analyses/differential_expression/smart_QC.Rmd has morphed into a potential preprint, so I'm moving the analyses related to that here.
R Shiny application that automates processing and quality control of ELISA results generated by the mobile outbreak laboratory (MOL) transformative investment capacity (TIC) project.
Ex vivo allograft monitoring dashboard
This repository has some basic concepts of applied statistics implemented in R.
QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides.
Repo for the files needed for embedding mappingQC in the Galaxy environment
Analyzing shotgun data
QC report generator for Hi-C pairs file
Argo float salinity calibration software
ChromeQC: Summarize sequencing library quality of 10x Genomics Chromium linked reads
Manuscript describing ChronQC is now available online in Bioinformatics
Quality control checks on continuous data. Example data is from a HOBO data logger with 30 minute intervals.
A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
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