Armbian operating system rolling releases provides automated nightly builds of maintained targets
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Updated
Aug 8, 2024 - Shell
Armbian operating system rolling releases provides automated nightly builds of maintained targets
This is a pipeline for quality control and cleanup for genetic data. It can be tailored to fit whole genome, exome sequencing or SNP array
DNAnexus app running MultiQC to generate run wide quality control (QC) using the outputs from MokaAMP, MokaPipe and MokaWES pipelines
Preprocessing and differential expression analysis for QuantSeq 3' mRNA-seq data
Code Health And Reporting Tools: Track and improve your code quality metrics
DNAnexus app generating a QC report on reads data
Filtering out invalid characters from fastq reads
Template for java with gradle projects
Integrated tool set to perform genotype quality control and imputation
🔬 A replication of ChiP-Seq analysis from an experiment regarding gene induction and repression during terminal erythropoiesis that are mediated by distinct epigenetic changes
Bioinformatic scripts for working on the UiO Abel compute cluster
DNAnexus app running peddy v0.3.1 (https://github.com/brentp/peddy) to perform a run wide QC check that the assigned gender matches the sample
Accel Amplicon HS wMID
🚦 Run Picard on BAM files and collate 90 metrics into one file.
Parallel / multithreading / multiple threads version of Prinseq
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