Riborex: Fast and flexible identification of differential translation from Ribo-seq data

Ribo-DT is a snakemake pipeline to infer single-codon and codon-pair dwell times as well as gene flux from ribosome profiling data using generalized linear model (GLM) with negative binomial noise model (Gobet et al., PNAS, 2020).

Fast data processing for ribosome footpring profiling experiments from bam files

workshop2020: Basic and advanced bioinformatics for RegenerationNEXT

Website source code for analysis of ribosome / polysome profiling

Plotting functions, frameshift detection and parsing of sequencing data from ribosome profiling experiments.

Pipeline and scripts for the comparative analysis of ribosome profiling and matched RNA sequencing data between organs and across species.