Cancer RiboSNitch-enriched elements detector
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Updated
Aug 15, 2018 - Perl
Cancer RiboSNitch-enriched elements detector
Split and decompose structural RNA multiple sequence alignments
Perl, R, Python, and Bash Shell source codes for high-throughput sequencing (the 2nd, 3rd, and 4th generation sequencing for DNA, RNA, and Protein) data analysis by integrating lots of open-source tools or softwares.
A pipeline and collection of tools to characterize RNA structure conservation, built around the ViennaRNA Package.
Perl implementation of Markov Chain for the course BIO331
Variant calling from RNA based sequencing data.
Perl, Bash shell, and R scripts for m6A-SAC-seq data analysis.
Discovering known and novel miRNAs from small RNA sequencing data - updated scripts before release
Roddy RNA-seq Workflow Plugin
Single-sequence and Profile-based Prediction of RNA Solvent Accessibility Using Dilated Convolution Neural Network
RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.
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