Here are
33 public repositories
matching this topic...
A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results
Updated
Nov 3, 2024
TypeScript
Utilities for building standardized command-line interfaces for biosimulation software packages
Updated
Oct 15, 2024
Python
Template for a repository for building a BioSimulators-compliant command-line interface and Dockerfile for a biosimulation program
Updated
Dec 14, 2021
Python
COPASI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Oct 7, 2024
Python
BioNetGen biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 25, 2022
Python
Tool for validating that biosimulation software tools implement the BioSimulators standards for simulators
Updated
Sep 30, 2024
Python
tellurium biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Oct 10, 2024
Python
An efficient Java™ solver implementation for SBML
GillesPy2 biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 25, 2022
Python
AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Apr 22, 2024
Python
Multimodal Evaluation for Sound Event Detection (SED)
Updated
Oct 7, 2021
Jupyter Notebook
CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 23, 2022
Python
Repository of rule-based models implemented with the BioNetGen model language (BNGL) and command-line program for publishing RuleHub to BioSimulations
Updated
Apr 4, 2023
Python
Command-line program and scheduled GitHub action for publishing the BiGG model repository to BioSimulations
Updated
Feb 1, 2024
Python
XPP mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 28, 2022
Python
Summary of the technical documentation for BioSimulators
Updated
Dec 14, 2021
Python
RBApy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
Command-line application for publishing the Physiome model repository of physiological models to the BioSimulations repository for simulation projects
Updated
May 16, 2022
JavaScript
LibSBMLSim mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
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