Single-cell copy number calling and event history reconstruction.
-
Updated
May 29, 2024 - C++
Single-cell copy number calling and event history reconstruction.
ASAP in R
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
Assembler for multiple RNA-seq samples
R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening data.
Bayesian haplotype-based mutation calling
Maintained elsewhere. See README.
Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)
An analytics package for single cell data
Clustering tumor cells based on SNVs from single-cell sequencing data
Software for exploration of gene expression data from single-cell RNA sequencing.
An archived version of the beachmat repository, see https://github.com/LTLA/beachmat for the active version.
Add a description, image, and links to the single-cell topic page so that developers can more easily learn about it.
To associate your repository with the single-cell topic, visit your repo's landing page and select "manage topics."