Metabolic Engineering Workbench
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Updated
Jun 9, 2024 - Python
Metabolic Engineering Workbench
⚡🧠A finite element Python implementation
An RNA virus strain-level identification tool for short reads.
A Schrödinger-Poisson solver for 2D materials with 1D interfaces (wires)
GAN/convolutional and Transformer models to predict missing mechanical information given limited known data in part of the domain, and further characterize the composite geometries from the recovered mechanical fields for 2D and 3D complex microstructures
Detect complete horizontal gene transfer (HGT) event rapidly and accurately from complex metagenomics data.
Planetary crustal and mantle properties, and lithospheric displacements, stress and strain, calculations in spherical harmonics.
Deforming crystal (lagrangian strain) for VASP
This repository is a pythonic solution to the 'GPS and infinitesimal strain analysis' method, published by Phil Resor and Vince Cronin. The non-pythonic method may be found on the SERC website under the GETSI teaching materials.
Abaqus script to compute Green strain from Nominal strain
Calculation of thermal conductivity of graphene knot under strain
bacterial strain identification
new type of 3D carbon structure
The scripts developed here were created for my personal PhD project for exploring the effect of strain on the superconducting critical temperature
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