Simple Contrastive Embedding of the Primary sequence of T cell Receptors
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Updated
Aug 31, 2024 - Python
Simple Contrastive Embedding of the Primary sequence of T cell Receptors
immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.
TCRscape - a tool for simultaneous multimodal gene expression and clonotype analysis of single T-cells profiled via the BD Rhapsody system.
An example of immunopipe
Pulls token information from the kleros t2cr and publishes them to ipfs following uniswap/token-lists schema.
Standardise TR/MH data
LIgO is a tool for simulation of adaptive immune receptors and repertoires.
A tool to predicting the specificity of T Cell Receptor optimized with Swarm Intelligence
📚 Tools and databases for analyzing HLA and VDJ genes.
🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info
Information and instructions for trying TCR workflow (test && commit || revert)
FrameDiPT: an SE(3) diffusion model for protein structure inpainting
An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.
Deep unsupervised learning methods for the identification and characterization of TCR specificity to Sars-Cov-2
Experiments for "On TCR Binding Predictors Failing to Generalize to Unseen Peptides", Grazioli et al., Frontiers in Immunology 2022
Test Commit || Reset for rspec + fswatch (on zsh)
Add a description, image, and links to the tcr topic page so that developers can more easily learn about it.
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