Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
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Updated
Jun 19, 2024 - C#
Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
Efficient querying of biological databases
Program and package that retrieves nucleotide coding sequences from NCBI that correspond to a set of input protein sequences.
Comprehensive Python client for the Uniprot REST API
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This UniProt Protein Parser is a tool that parses data from an input file containing multiple UniProt records and generates an output `.txt` file, which contains useful information for each protein including their IDs, amino acid sequences and transmembrane segment positions.
Store the bioinformatic information in a python object given a Uniprot ID
A Ruby on Rails application for proteomics data analysis
Pipeline plugins for PALADIN, providing HPC support, abundance (taxonomy, go terms), customized reports, etc
Protein Alignment and Detection Interface
rbioapi: User-Friendly R Interface to Biologic Web Services' API
From taxonomic affiliations to annotated proteins using UniProt database.
A Python script to map PDB ID + chain ID to UniProt ID.
Robust and replicable information system for exploring protein metamorphisms.
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