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Fix pysam build #674

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Merged
merged 1 commit into from
Jun 8, 2020
Merged

Fix pysam build #674

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5 changes: 2 additions & 3 deletions .travis.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -19,8 +19,7 @@ install:
# We do this conditionally because it saves us some downloading if the
# version is the same.
- if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then
curl https://repo.anaconda.com/miniconda/Miniconda3-latest-MacOSX-x86_64.sh >
miniconda.sh;
curl https://repo.anaconda.com/miniconda/Miniconda3-latest-MacOSX-x86_64.sh > miniconda.sh;
export TRAVIS_PYTHON_VERSION="3.6";
else
wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
Expand All @@ -47,7 +46,7 @@ install:
# codecov requires a more recent version of certifi, but we can't uninstall the old one
# see https://github.com/tskit-dev/tskit/issues/366
- pip install --ignore-installed certifi
- pip install -r python/requirements/development.txt
- HTSLIB_CONFIGURE_OPTIONS=--disable-bz2 pip install -r python/requirements/development.txt
- pip install -e python

script:
Expand Down