Releases: ucsd-ccbb/NetColoc
0.1.7
Bug fixes
-
ipycytoscape added as a dependency
-
ipywidgets added as a dependency
-
Added
network_colocalization.sweep_input_pvals()to sweep p-values and scores -
Added
network_colocalization.calculate_network_enrichment()to sweep over z-score thresholds -
netprop.get_individual_heats_matrix()can take a networkxGraphobject and internally call
netprop.get_normalized_adjancency_matrix(). Documentation updated in both methods to note
that the resulting matrices can be saved vianumpy.save()and retrieved vianumpy.load() -
example_notebooks/ASD_CHD_NetColoc_analysis.ipynbnow visualizes hierarchy using
[ipycytoscape](https://ipycytoscape.readthedocs.io/en/latest] -
example_notebooks/ASD_CHD_NetColoc_analysis.ipynbupdated with a note about usingnumpy.save()
andnumpy.load()to save and retrieve result fromnetprop.get_individual_heats_matrix()