If you vg autoindex -w sr-giraffe -g graph.gfa.gz, it can fail with:
[IndexRegistry] Checking for haplotype lines in GFA.
error[IndexRegistry] W-line does not have tab following line type
It should instead report that vg does not currently support importing compressed GFA.
We should also consider how to actually support importing compressed GFA.
If you
vg autoindex -w sr-giraffe -g graph.gfa.gz, it can fail with:It should instead report that vg does not currently support importing compressed GFA.
We should also consider how to actually support importing compressed GFA.