v0.20.0 / 0.20.1 / 0.20.2
v0.20.0 / 0.20.1 / 0.20.2
Major new function - Long-read input support (Nanopore >= R10.4.1 or PacBio HiFi recommended), thanks to @thepatientwait.
- Lyrebird database updated to v0.3.1, improving exclusion of off-target (non-phage) sequences
microbial_fractionsubcommand renamed toprokaryotic_fraction(old name retained as synonym)- More flexible options for specifying genome input in
pipemode appriasemode: Add--stream-inputs- GlobDB R226 metapackage released. To use it, decompress it and then specify
pipe --metapackage /path/to/GlobDB_r226.metapackage_v1.smpkgrather than setting the environment variable.
Thanks to @AroneyS, @rzhao-2, @EisenRa, @thepatientwait, @dspeth, @Anna-MarieSeelen, @l-gallucci, @ilnamkang and others for contributions and testing.