fix: 8 core system refinements (DoS, Windows I/O, memory leaks)

[xircons]

This PR introduces critical system stability and security improvements:

• Windows-safe atomic writes in jsonStore.ts (EXDEV fallback)
• Enhanced Zod schema inference across ALL collection items
• ReDoS protection for _like filters
• File watcher memory leak fixes (explicit .close())
• Safe lock file release in all exit scenarios
• Accurate X-Total-Count metadata calculation
• Capped configuration useCount to prevent overflow
• Global --reset flag relocation

[github-actions]

🎉 This PR is included in version 1.2.0 🎉

The release is available on:

• npm package (@latest dist-tag)
• GitHub release

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